IL_8Q5I_049
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 8Q5I|1|1|U|1187, 8Q5I|1|1|C|1188, 8Q5I|1|1|C|1312, 8Q5I|1|1|A|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_049 not in the Motif Atlas
- Homologous match to IL_8C3A_054
- Geometric discrepancy: 0.0753
- The information below is about IL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|1|C|1183
8Q5I|1|1|U|1184
8Q5I|1|1|C|1185
8Q5I|1|1|A|1186
8Q5I|1|1|U|1187
8Q5I|1|1|C|1188
8Q5I|1|1|A|1189
8Q5I|1|1|G|1190
*
8Q5I|1|1|C|1310
8Q5I|1|1|U|1311
8Q5I|1|1|C|1312
8Q5I|1|1|A|1313
8Q5I|1|1|A|1314
8Q5I|1|1|G|1315
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AN
- 60S ribosomal protein L40-B
- Chain q
- 60S ribosomal protein L9-B
- Chain u
- 60S ribosomal protein L14-B
- Chain w
- Ribosomal protein L13
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