IL_8Q5I_197
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 8Q5I|1|A|C|1143, 8Q5I|1|A|C|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_197 not in the Motif Atlas
- Homologous match to IL_8C3A_449
- Geometric discrepancy: 0.0548
- The information below is about IL_8C3A_449
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.10
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 16
Unit IDs
8Q5I|1|A|A|1142
8Q5I|1|A|C|1143
8Q5I|1|A|C|1144
8Q5I|1|A|A|1145
*
8Q5I|1|A|U|1604
8Q5I|1|A|C|1605
8Q5I|1|A|C|1606
8Q5I|1|A|C|1607
8Q5I|1|A|U|1608
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- Ribosomal protein S7
- Chain R
- 40S ribosomal protein S16
- Chain d
- 40S ribosomal protein S28-B
Coloring options: