IL_8QBT_103
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 8QBT|1|A|U|2689, 8QBT|1|A|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QBT_103 not in the Motif Atlas
- Homologous match to IL_5J7L_348
- Geometric discrepancy: 0.0676
- The information below is about IL_5J7L_348
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
8QBT|1|A|U|2687
8QBT|1|A|G|2688
8QBT|1|A|U|2689
8QBT|1|A|U|2690
8QBT|1|A|C|2691
*
8QBT|1|A|G|2718
8QBT|1|A|G|2719
8QBT|1|A|U|2720
8QBT|1|A|A|2721
8QBT|1|A|G|2722
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain N
- Large ribosomal subunit protein bL17
- Chain P
- Large ribosomal subunit protein bL19
Coloring options: