IL_8QBT_151
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QBT_151 not in the Motif Atlas
- Homologous match to IL_5J7L_034
- Geometric discrepancy: 0.053
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
8QBT|1|i|A|673
8QBT|1|i|G|674
8QBT|1|i|A|675
8QBT|1|i|A|676
8QBT|1|i|U|677
8QBT|1|i|U|678
*
8QBT|1|i|A|712
8QBT|1|i|G|713
8QBT|1|i|G|714
8QBT|1|i|A|715
8QBT|1|i|A|716
8QBT|1|i|U|717
Current chains
- Chain i
- 16S rRNA
Nearby chains
- Chain 3
- Small ribosomal subunit protein bS21
- Chain C
- Large ribosomal subunit protein uL2
- Chain n
- 30S ribosomal protein S6, fully modified isoform
- Chain s
- 30S ribosomal protein S11
- Chain z
- Small ribosomal subunit protein bS18
Coloring options: