IL_8QCQ_092
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CA*UACG
- Length
- 6 nucleotides
- Bulged bases
- 8QCQ|1|A|A|2601, 8QCQ|1|A|C|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QCQ_092 not in the Motif Atlas
- Geometric match to IL_4WF9_096
- Geometric discrepancy: 0.085
- The information below is about IL_4WF9_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
8QCQ|1|A|C|2541
8QCQ|1|A|A|2542
*
8QCQ|1|A|U|2600
8QCQ|1|A|A|2601
8QCQ|1|A|C|2602
8QCQ|1|A|G|2603
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- ApdA nascent chain
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain y
- Transfer RNA; tRNA
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