IL_8QCQ_103
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UGGAAG*UGGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QCQ_103 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.0741
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
8QCQ|1|A|U|2872
8QCQ|1|A|G|2873
8QCQ|1|A|G|2874
8QCQ|1|A|A|2875
8QCQ|1|A|A|2876
8QCQ|1|A|G|2877
*
8QCQ|1|A|U|2890
8QCQ|1|A|G|2891
8QCQ|1|A|G|2892
8QCQ|1|A|A|2893
8QCQ|1|A|G|2894
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L17
- Chain P
- 50S ribosomal protein L19
Coloring options: