IL_8QPP_175
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCGCU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 8QPP|1|X|U|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_175 not in the Motif Atlas
- Homologous match to IL_5J7L_347
- Geometric discrepancy: 0.0984
- The information below is about IL_5J7L_347
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
8QPP|1|X|C|2709
8QPP|1|X|C|2710
8QPP|1|X|G|2711
8QPP|1|X|C|2712
8QPP|1|X|U|2713
*
8QPP|1|X|A|2754
8QPP|1|X|U|2755
8QPP|1|X|G|2756
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain a
- Large ribosomal subunit protein uL3
- Chain f
- 50S ribosomal protein L14
- Chain m
- 50S ribosomal protein L19
Coloring options: