IL_8QYX_037
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- GAAGGUGG*UGUUACAGC
- Length
- 17 nucleotides
- Bulged bases
- 8QYX|1|A2|G|748, 8QYX|1|A2|C|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_037 not in the Motif Atlas
- Geometric match to IL_8C3A_022
- Geometric discrepancy: 0.1036
- The information below is about IL_8C3A_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8QYX|1|A2|G|745
8QYX|1|A2|A|746
8QYX|1|A2|A|747
8QYX|1|A2|G|748
8QYX|1|A2|G|749
8QYX|1|A2|U|750
8QYX|1|A2|G|751
8QYX|1|A2|G|752
*
8QYX|1|A2|U|911
8QYX|1|A2|G|912
8QYX|1|A2|U|913
8QYX|1|A2|U|914
8QYX|1|A2|A|915
8QYX|1|A2|C|916
8QYX|1|A2|A|917
8QYX|1|A2|G|918
8QYX|1|A2|C|919
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain G1
- 60S ribosomal protein L14
- Chain M1
- 60S ribosomal protein L18a
Coloring options: