IL_8QYX_070
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 8QYX|1|A2|U|2070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_070 not in the Motif Atlas
- Homologous match to IL_8P9A_276
- Geometric discrepancy: 0.1008
- The information below is about IL_8P9A_276
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8QYX|1|A2|U|1905
8QYX|1|A2|U|1906
8QYX|1|A2|A|1907
8QYX|1|A2|A|1908
8QYX|1|A2|G|1909
*
8QYX|1|A2|C|2067
8QYX|1|A2|C|2068
8QYX|1|A2|A|2069
8QYX|1|A2|U|2070
8QYX|1|A2|A|2071
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain A1
- Large ribosomal subunit protein uL30
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain K1
- 60S ribosomal protein L18
- Chain Y1
- 60S ribosomal protein L32
- Chain Z1
- 60S ribosomal protein L35a
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