IL_8QYX_096
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- AACAA(OMU)G*C(PSU)AU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_096 not in the Motif Atlas
- Homologous match to IL_8P9A_302
- Geometric discrepancy: 0.0864
- The information below is about IL_8P9A_302
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.1
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
8QYX|1|A2|A|2832
8QYX|1|A2|A|2833
8QYX|1|A2|C|2834
8QYX|1|A2|A|2835
8QYX|1|A2|A|2836
8QYX|1|A2|OMU|2837
8QYX|1|A2|G|2838
*
8QYX|1|A2|C|3850
8QYX|1|A2|PSU|3851
8QYX|1|A2|A|3852
8QYX|1|A2|U|3853
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain E2
- Large ribosomal subunit protein uL3
- Chain J1
- 60S ribosomal protein L17
- Chain X1
- 60S ribosomal protein L31
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