IL_8QYX_101
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 8QYX|1|A2|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_101 not in the Motif Atlas
- Homologous match to IL_8C3A_084
- Geometric discrepancy: 0.0685
- The information below is about IL_8C3A_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.4
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8QYX|1|A2|C|2867
8QYX|1|A2|G|2868
8QYX|1|A2|U|2869
8QYX|1|A2|A|2870
8QYX|1|A2|A|2871
8QYX|1|A2|C|2872
*
8QYX|1|A2|G|2877
8QYX|1|A2|G|2878
8QYX|1|A2|A|2879
8QYX|1|A2|U|2880
8QYX|1|A2|A|2881
8QYX|1|A2|A|2882
8QYX|1|A2|G|2883
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain j1
- 60S ribosomal protein L37a
Coloring options: