IL_8QYX_137

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|C|4466
8QYX|1|A2|A|4467
8QYX|1|A2|U|4468
8QYX|1|A2|U|4469
8QYX|1|A2|G|4470
*
8QYX|1|A2|C|4485
8QYX|1|A2|C|4486
8QYX|1|A2|A|4487
8QYX|1|A2|A|4488
8QYX|1|A2|G|4489
8QYX|1|A2|C|4490
8QYX|1|A2|G|4491

Current chains

Chain A2

28S rRNA

Nearby chains

Chain C1

60S ribosomal protein L9

Chain E2

Large ribosomal subunit protein uL3

Chain I1

60S ribosomal protein L13a

Chain P1

60S ribosomal protein L23

Chain g1

Large ribosomal subunit protein eL40