IL_8QYX_169
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- GUUAGUAC*GGAAUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62167.1
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
8QYX|1|B2|G|71
8QYX|1|B2|U|72
8QYX|1|B2|U|73
8QYX|1|B2|A|74
8QYX|1|B2|G|75
8QYX|1|B2|U|76
8QYX|1|B2|A|77
8QYX|1|B2|C|78
*
8QYX|1|B2|G|98
8QYX|1|B2|G|99
8QYX|1|B2|A|100
8QYX|1|B2|A|101
8QYX|1|B2|U|102
8QYX|1|B2|A|103
8QYX|1|B2|C|104
Current chains
- Chain B2
- 5S rRNA
Nearby chains
- Chain A1
- Large ribosomal subunit protein uL30
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain D1
- Ribosomal protein uL16-like
- Chain G2
- 60S ribosomal protein L5
- Chain M1
- 60S ribosomal protein L18a
- Chain N1
- 60S ribosomal protein L21
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