IL_8R3V_014

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UUAAC*GGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_014 not in the Motif Atlas

Homologous match to IL_5J7L_258

Geometric discrepancy: 0.0829

The information below is about IL_5J7L_258

Detailed Annotation

AAA cross-strand stack

Broad Annotation

AAA cross-strand stack

Motif group

IL_66798.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8R3V|1|72|U|606
8R3V|1|72|U|607
8R3V|1|72|A|608
8R3V|1|72|A|609
8R3V|1|72|C|610
*
8R3V|1|72|G|618
8R3V|1|72|G|619
8R3V|1|72|G|620
8R3V|1|72|A|621
8R3V|1|72|G|622

Current chains

Chain 72

23S ribosomal RNA

Nearby chains