IL_8R3V_033

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UCCCAAAG*CA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_033 not in the Motif Atlas

Geometric match to IL_5J7L_278

Geometric discrepancy: 0.0709

The information below is about IL_5J7L_278

Detailed Annotation

SSU/LSU pseudoknot

Broad Annotation

No text annotation

Motif group

IL_41203.4

Basepair signature

cWW-L-cWW-L-L-R-cSH

Number of instances in this motif group

11

Unit IDs

8R3V|1|72|U|1004
8R3V|1|72|C|1005
8R3V|1|72|C|1006
8R3V|1|72|C|1007
8R3V|1|72|A|1008
8R3V|1|72|A|1009
8R3V|1|72|A|1010
8R3V|1|72|G|1011
*
8R3V|1|72|C|1150
8R3V|1|72|A|1151

Current chains

Chain 72

23S ribosomal RNA

Nearby chains