IL_8R3V_105

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

8R3V|1|72|U|2689, 8R3V|1|72|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_105 not in the Motif Atlas

Homologous match to IL_4WF9_102

Geometric discrepancy: 0.093

The information below is about IL_4WF9_102

Detailed Annotation

UAA/GAN related, with intercalation

Broad Annotation

UAA/GAN related, with intercalation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

8R3V|1|72|U|2687
8R3V|1|72|G|2688
8R3V|1|72|U|2689
8R3V|1|72|U|2690
8R3V|1|72|C|2691
*
8R3V|1|72|G|2718
8R3V|1|72|G|2719
8R3V|1|72|U|2720
8R3V|1|72|A|2721
8R3V|1|72|G|2722

Current chains

Chain 72

23S ribosomal RNA

Nearby chains