IL_8R3V_107

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_107 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.065

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8R3V|1|72|G|2737
8R3V|1|72|A|2738
8R3V|1|72|U|2739
8R3V|1|72|A|2740
8R3V|1|72|A|2741
8R3V|1|72|G|2742
*
8R3V|1|72|C|2762
8R3V|1|72|G|2763
8R3V|1|72|A|2764
8R3V|1|72|A|2765
8R3V|1|72|A|2766
8R3V|1|72|C|2767

Current chains

Chain 72

23S ribosomal RNA

Nearby chains