IL_8R3V_116
3D structure
- PDB id
- 8R3V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (non-rotated disome interface)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGAUGGUAG*CGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R3V_116 not in the Motif Atlas
- Homologous match to IL_5J7L_359
- Geometric discrepancy: 0.1058
- The information below is about IL_5J7L_359
- Detailed Annotation
- Bacterial 5S Loop E
- Broad Annotation
- Loop E
- Motif group
- IL_56455.6
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8R3V|1|82|C|71
8R3V|1|82|G|72
8R3V|1|82|A|73
8R3V|1|82|U|74
8R3V|1|82|G|75
8R3V|1|82|G|76
8R3V|1|82|U|77
8R3V|1|82|A|78
8R3V|1|82|G|79
*
8R3V|1|82|C|97
8R3V|1|82|G|98
8R3V|1|82|A|99
8R3V|1|82|G|100
8R3V|1|82|A|101
8R3V|1|82|G|102
8R3V|1|82|U|103
8R3V|1|82|A|104
8R3V|1|82|G|105
Current chains
- Chain 82
- 5S ribosomal RNA
Nearby chains
- Chain 32
- 50S ribosomal protein L30
- Chain 72
- Large subunit ribosomal RNA; LSU rRNA
- Chain h2
- 50S ribosomal protein L16
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