IL_8R3V_156

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGUG*CGUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_156 not in the Motif Atlas

Geometric match to IL_4EYA_010

Geometric discrepancy: 0.3217

The information below is about IL_4EYA_010

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_51479.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

8R3V|1|A1|U|835
8R3V|1|A1|G|836
8R3V|1|A1|U|837
8R3V|1|A1|G|838
*
8R3V|1|A1|C|848
8R3V|1|A1|G|849
8R3V|1|A1|U|850
8R3V|1|A1|G|851

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain F1

30S ribosomal protein S6

Chain R1

Small ribosomal subunit protein bS18