IL_8R3V_162

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GACAU*GAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_162 not in the Motif Atlas

Geometric match to IL_8C3A_432

Geometric discrepancy: 0.3624

The information below is about IL_8C3A_432

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58579.2

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

6

Unit IDs

8R3V|1|A1|G|993
8R3V|1|A1|A|994
8R3V|1|A1|C|995
8R3V|1|A1|A|996
8R3V|1|A1|U|997
*
8R3V|1|A1|G|1043
8R3V|1|A1|A|1044
8R3V|1|A1|C|1045

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain N1

Small ribosomal subunit protein uS14