IL_8R55_021

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GAACAAG*CCUUGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_021 not in the Motif Atlas

Homologous match to IL_5J7L_023

Geometric discrepancy: 0.5265

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

8R55|1|A|G|458
8R55|1|A|A|459
8R55|1|A|A|460
8R55|1|A|C|461
8R55|1|A|A|462
8R55|1|A|A|463
8R55|1|A|G|464
*
8R55|1|A|C|486
8R55|1|A|C|487
8R55|1|A|U|488
8R55|1|A|U|489
8R55|1|A|G|490
8R55|1|A|A|491
8R55|1|A|C|492

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain P

30S ribosomal protein S16