IL_8R55_039
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_039 not in the Motif Atlas
- Homologous match to IL_5J7L_038
- Geometric discrepancy: 0.1337
- The information below is about IL_5J7L_038
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.4
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
8R55|1|A|G|897
8R55|1|A|G|898
8R55|1|A|A|899
8R55|1|A|G|900
8R55|1|A|U|901
8R55|1|A|A|902
8R55|1|A|C|903
8R55|1|A|G|904
*
8R55|1|A|U|915
8R55|1|A|G|916
8R55|1|A|A|917
8R55|1|A|A|918
8R55|1|A|A|919
8R55|1|A|C|920
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain L
- 30S ribosomal protein S12
Coloring options: