IL_8R55_062
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 8R55|1|A|A|1502, 8R55|1|A|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_062 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.2393
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8R55|1|A|C|1416
8R55|1|A|A|1417
8R55|1|A|C|1418
*
8R55|1|A|G|1501
8R55|1|A|A|1502
8R55|1|A|A|1503
8R55|1|A|G|1504
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain L
- 30S ribosomal protein S12
- Chain V
- mRNA (33-MER)
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: