IL_8R55_071
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_071 not in the Motif Atlas
- Homologous match to IL_4WF9_001
- Geometric discrepancy: 0.0898
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
8R55|1|X|G|24
8R55|1|X|U|25
8R55|1|X|G|26
8R55|1|X|G|27
8R55|1|X|A|28
8R55|1|X|U|29
8R55|1|X|G|30
*
8R55|1|X|C|556
8R55|1|X|U|557
8R55|1|X|G|558
8R55|1|X|A|559
8R55|1|X|A|560
8R55|1|X|A|561
8R55|1|X|C|562
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain n
- Large ribosomal subunit protein bL20
- Chain r
- Large ribosomal subunit protein uL22
Coloring options: