IL_8R55_086

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CUC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_086 not in the Motif Atlas

Homologous match to IL_4WF9_018

Geometric discrepancy: 0.3063

The information below is about IL_4WF9_018

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

8R55|1|X|C|639
8R55|1|X|U|640
8R55|1|X|C|641
*
8R55|1|X|G|707
8R55|1|X|U|708
8R55|1|X|G|709

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 3

Large ribosomal subunit protein bL35

Chain b

Large ribosomal subunit protein uL4

Chain i

50S ribosomal protein L15