IL_8R55_126

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CAAUG*CUAG

Length

9 nucleotides

Bulged bases

8R55|1|X|U|1466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_126 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.4313

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

8R55|1|X|C|1463
8R55|1|X|A|1464
8R55|1|X|A|1465
8R55|1|X|U|1466
8R55|1|X|G|1467
*
8R55|1|X|C|1625
8R55|1|X|U|1626
8R55|1|X|A|1627
8R55|1|X|G|1628

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains