IL_8R55_139
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8R55|1|X|G|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_139 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.1899
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8R55|1|X|A|1714
8R55|1|X|C|1715
8R55|1|X|U|1716
8R55|1|X|C|1717
8R55|1|X|G|1718
8R55|1|X|G|1719
*
8R55|1|X|C|2019
8R55|1|X|U|2020
8R55|1|X|G|2021
8R55|1|X|U|2022
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain a
- Large ribosomal subunit protein uL3
- Chain f
- 50S ribosomal protein L14
Coloring options: