IL_8R55_147

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UUAAG*UGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_147 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.1628

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

8R55|1|X|U|1880
8R55|1|X|U|1881
8R55|1|X|A|1882
8R55|1|X|A|1883
8R55|1|X|G|1884
*
8R55|1|X|U|1916
8R55|1|X|G|1917
8R55|1|X|A|1918
8R55|1|X|A|1919
8R55|1|X|G|1920

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains