IL_8R55_148

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

AGGAG*CGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_148 not in the Motif Atlas

Homologous match to IL_7RQB_075

Geometric discrepancy: 0.1916

The information below is about IL_7RQB_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

8R55|1|X|A|1885
8R55|1|X|G|1886
8R55|1|X|G|1887
8R55|1|X|A|1888
8R55|1|X|G|1889
*
8R55|1|X|C|1911
8R55|1|X|G|1912
8R55|1|X|A|1913
8R55|1|X|A|1914
8R55|1|X|U|1915

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains