IL_8R55_150

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_150 not in the Motif Atlas

Geometric match to IL_7A0S_071

Geometric discrepancy: 0.0905

The information below is about IL_7A0S_071

Detailed Annotation

Bulged stacked bases

Broad Annotation

Bulged stacked bases

Motif group

IL_24886.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

12

Unit IDs

8R55|1|X|G|1962
8R55|1|X|C|1963
*
8R55|1|X|G|1993
8R55|1|X|C|1994
8R55|1|X|A|1995
8R55|1|X|C|1996

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain U

Transfer RNA; tRNA