IL_8R55_156

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CAG*UGGG

Length

7 nucleotides

Bulged bases

8R55|1|X|G|2267

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_156 not in the Motif Atlas

Homologous match to IL_7RQB_082

Geometric discrepancy: 0.1243

The information below is about IL_7RQB_082

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_38958.7

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

15

Unit IDs

8R55|1|X|C|2110
8R55|1|X|A|2111
8R55|1|X|G|2112
*
8R55|1|X|U|2265
8R55|1|X|G|2266
8R55|1|X|G|2267
8R55|1|X|G|2268

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain Z

Large ribosomal subunit protein uL2

Chain v

Large ribosomal subunit protein bL28