IL_8R55_176
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 8R55|1|X|U|2718, 8R55|1|X|A|2719
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_176 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.0956
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
8R55|1|X|U|2716
8R55|1|X|G|2717
8R55|1|X|U|2718
8R55|1|X|A|2719
8R55|1|X|C|2720
*
8R55|1|X|G|2747
8R55|1|X|G|2748
8R55|1|X|U|2749
8R55|1|X|A|2750
8R55|1|X|G|2751
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain a
- Large ribosomal subunit protein uL3
- Chain k
- Large ribosomal subunit protein bL17
- Chain m
- 50S ribosomal protein L19
Coloring options: