IL_8R55_177

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UU*AUCG

Length

6 nucleotides

Bulged bases

8R55|1|X|U|2741, 8R55|1|X|C|2742

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_177 not in the Motif Atlas

Homologous match to IL_4WF9_103

Geometric discrepancy: 0.1175

The information below is about IL_4WF9_103

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_44609.1

Basepair signature

cWW-cWW

Number of instances in this motif group

28

Unit IDs

8R55|1|X|U|2724
8R55|1|X|U|2725
*
8R55|1|X|A|2740
8R55|1|X|U|2741
8R55|1|X|C|2742
8R55|1|X|G|2743

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain k

Large ribosomal subunit protein bL17

Chain m

50S ribosomal protein L19