IL_8R55_181

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GAG*UGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_181 not in the Motif Atlas

Homologous match to IL_4WF9_107

Geometric discrepancy: 0.1406

The information below is about IL_4WF9_107

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

8R55|1|X|G|2868
8R55|1|X|A|2869
8R55|1|X|G|2870
*
8R55|1|X|U|2896
8R55|1|X|G|2897
8R55|1|X|A|2898
8R55|1|X|C|2899

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain a

Large ribosomal subunit protein uL3

Chain k

Large ribosomal subunit protein bL17

Chain m

50S ribosomal protein L19