IL_8R55_182

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UGGAAG*UGGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_182 not in the Motif Atlas

Homologous match to IL_4WF9_108

Geometric discrepancy: 0.1485

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

8R55|1|X|U|2872
8R55|1|X|G|2873
8R55|1|X|G|2874
8R55|1|X|A|2875
8R55|1|X|A|2876
8R55|1|X|G|2877
*
8R55|1|X|U|2890
8R55|1|X|G|2891
8R55|1|X|G|2892
8R55|1|X|A|2893
8R55|1|X|G|2894

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain k

Large ribosomal subunit protein bL17

Chain m

50S ribosomal protein L19