IL_8RCL_102

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

8RCL|1|72|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_102 not in the Motif Atlas

Homologous match to IL_5J7L_345

Geometric discrepancy: 0.0757

The information below is about IL_5J7L_345

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.3

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

8RCL|1|72|C|2636
8RCL|1|72|U|2637
8RCL|1|72|G|2638
8RCL|1|72|A|2639
8RCL|1|72|G|2640
*
8RCL|1|72|C|2774
8RCL|1|72|G|2775
8RCL|1|72|A|2776
8RCL|1|72|G|2777
8RCL|1|72|A|2778
8RCL|1|72|U|2779
8RCL|1|72|G|2780
8RCL|1|72|A|2781
8RCL|1|72|G|2782

Current chains

Chain 72

23S ribosomal RNA

Nearby chains