3D structure

PDB id
8RCL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli paused disome complex (Non-rotated disome interface class 1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.49 Å

Loop

Sequence
UGUAG*CGUAGAGA
Length
13 nucleotides
Bulged bases
8RCL|1|A1|A|702
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8RCL_153 not in the Motif Atlas
Geometric match to IL_5J7L_035
Geometric discrepancy: 0.1862
The information below is about IL_5J7L_035
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_01488.3
Basepair signature
cWW-tSS-tSH-L-R-tHS-L-cWW
Number of instances in this motif group
10

Unit IDs

8RCL|1|A1|U|684
8RCL|1|A1|G|685
8RCL|1|A1|U|686
8RCL|1|A1|A|687
8RCL|1|A1|G|688
*
8RCL|1|A1|C|699
8RCL|1|A1|G|700
8RCL|1|A1|U|701
8RCL|1|A1|A|702
8RCL|1|A1|G|703
8RCL|1|A1|A|704
8RCL|1|A1|G|705
8RCL|1|A1|A|706

Current chains

Chain A1
16S ribosomal RNA

Nearby chains

Chain K1
Small ribosomal subunit protein uS11

Coloring options:


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