IL_8RCL_217

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UGAAAUCC*GAACUG

Length

14 nucleotides

Bulged bases

8RCL|1|A2|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_217 not in the Motif Atlas

Homologous match to IL_5J7L_030

Geometric discrepancy: 0.082

The information below is about IL_5J7L_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78349.3

Basepair signature

cWW-L-R-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

8RCL|1|A2|U|605
8RCL|1|A2|G|606
8RCL|1|A2|A|607
8RCL|1|A2|A|608
8RCL|1|A2|A|609
8RCL|1|A2|U|610
8RCL|1|A2|C|611
8RCL|1|A2|C|612
*
8RCL|1|A2|G|628
8RCL|1|A2|A|629
8RCL|1|A2|A|630
8RCL|1|A2|C|631
8RCL|1|A2|U|632
8RCL|1|A2|G|633

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain D2

Small ribosomal subunit protein uS4

Chain H2

Small ribosomal subunit protein uS8