IL_8RCM_143
3D structure
- PDB id
- 8RCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Non-rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 8RCM|1|A1|A|532, 8RCM|1|A1|U|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RCM_143 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1704
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
8RCM|1|A1|G|515
8RCM|1|A1|U|516
8RCM|1|A1|G|517
8RCM|1|A1|C|518
8RCM|1|A1|C|519
8RCM|1|A1|A|520
8RCM|1|A1|G|521
*
8RCM|1|A1|C|528
8RCM|1|A1|G|529
8RCM|1|A1|G|530
8RCM|1|A1|U|531
8RCM|1|A1|A|532
8RCM|1|A1|A|533
8RCM|1|A1|U|534
8RCM|1|A1|A|535
8RCM|1|A1|C|536
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain C1
- Small ribosomal subunit protein uS3
- Chain D1
- Small ribosomal subunit protein uS4
- Chain L1
- Small ribosomal subunit protein uS12
- Chain V2
- messenger RNA
- Chain Y1
- Transfer RNA; tRNA
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