IL_8RCS_084

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

UGAGC*GUUUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_084 not in the Motif Atlas

Homologous match to IL_4WF9_084

Geometric discrepancy: 0.4843

The information below is about IL_4WF9_084

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

8RCS|1|72|U|2099
8RCS|1|72|G|2100
8RCS|1|72|A|2101
8RCS|1|72|G|2102
8RCS|1|72|C|2103
*
8RCS|1|72|G|2186
8RCS|1|72|U|2187
8RCS|1|72|U|2188
8RCS|1|72|U|2189
8RCS|1|72|G|2190

Current chains

Chain 72

23S ribosomal RNA

Nearby chains