IL_8RCS_105

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

8RCS|1|72|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_105 not in the Motif Atlas

Homologous match to IL_5J7L_345

Geometric discrepancy: 0.0793

The information below is about IL_5J7L_345

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.3

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

8RCS|1|72|C|2636
8RCS|1|72|U|2637
8RCS|1|72|G|2638
8RCS|1|72|A|2639
8RCS|1|72|G|2640
*
8RCS|1|72|C|2774
8RCS|1|72|G|2775
8RCS|1|72|A|2776
8RCS|1|72|G|2777
8RCS|1|72|A|2778
8RCS|1|72|U|2779
8RCS|1|72|G|2780
8RCS|1|72|A|2781
8RCS|1|72|G|2782

Current chains

Chain 72

23S ribosomal RNA

Nearby chains