IL_8RCS_187

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

AAGAAG*CCACU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_187 not in the Motif Atlas

Homologous match to IL_5J7L_063

Geometric discrepancy: 0.1846

The information below is about IL_5J7L_063

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_80231.1

Basepair signature

cWW-L-R-L-R-L-R-tHS-cWW

Number of instances in this motif group

2

Unit IDs

8RCS|1|A1|A|1430
8RCS|1|A1|A|1431
8RCS|1|A1|G|1432
8RCS|1|A1|A|1433
8RCS|1|A1|A|1434
8RCS|1|A1|G|1435
*
8RCS|1|A1|C|1466
8RCS|1|A1|C|1467
8RCS|1|A1|A|1468
8RCS|1|A1|C|1469
8RCS|1|A1|U|1470

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain T1

Small ribosomal subunit protein bS20