IL_8RCS_209

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

ACAAUG*UGAU

Length

10 nucleotides

Bulged bases

8RCS|1|A2|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_209 not in the Motif Atlas

Geometric match to IL_4V88_408

Geometric discrepancy: 0.2378

The information below is about IL_4V88_408

Detailed Annotation

C-loop with extra cWW pair

Broad Annotation

C-loop

Motif group

IL_11347.2

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

8RCS|1|A2|A|371
8RCS|1|A2|C|372
8RCS|1|A2|A|373
8RCS|1|A2|A|374
8RCS|1|A2|U|375
8RCS|1|A2|G|376
*
8RCS|1|A2|U|387
8RCS|1|A2|G|388
8RCS|1|A2|A|389
8RCS|1|A2|U|390

Current chains

Chain A2

16S ribosomal RNA

Nearby chains