IL_8RCS_220

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

UGAAAUCC*GAACUG

Length

14 nucleotides

Bulged bases

8RCS|1|A2|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_220 not in the Motif Atlas

Homologous match to IL_5J7L_030

Geometric discrepancy: 0.0959

The information below is about IL_5J7L_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78349.3

Basepair signature

cWW-L-R-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

8RCS|1|A2|U|605
8RCS|1|A2|G|606
8RCS|1|A2|A|607
8RCS|1|A2|A|608
8RCS|1|A2|A|609
8RCS|1|A2|U|610
8RCS|1|A2|C|611
8RCS|1|A2|C|612
*
8RCS|1|A2|G|628
8RCS|1|A2|A|629
8RCS|1|A2|A|630
8RCS|1|A2|C|631
8RCS|1|A2|U|632
8RCS|1|A2|G|633

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain D2

Small ribosomal subunit protein uS4

Chain H2

Small ribosomal subunit protein uS8