IL_8RCT_249

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

8RCT|1|A2|A|1257, 8RCT|1|A2|A|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_249 not in the Motif Atlas

Homologous match to IL_5J7L_055

Geometric discrepancy: 0.1848

The information below is about IL_5J7L_055

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

8RCT|1|A2|G|1255
8RCT|1|A2|A|1256
8RCT|1|A2|A|1257
8RCT|1|A2|G|1258
*
8RCT|1|A2|C|1277
8RCT|1|A2|G|1278
8RCT|1|A2|G|1279
8RCT|1|A2|A|1280
8RCT|1|A2|C|1281
8RCT|1|A2|C|1282

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain C2

Small ribosomal subunit protein uS3

Chain I2

Small ribosomal subunit protein uS9

Chain J2

30S ribosomal protein S10

Chain N2

Small ribosomal subunit protein uS14