IL_8RJC_022
3D structure
- PDB id
- 8RJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec61-TRAP, open conformation 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.90061 Å
Loop
- Sequence
- AUUCAAC*GCGCAUUU
- Length
- 15 nucleotides
- Bulged bases
- 8RJC|1|K|U|467, 8RJC|1|K|U|687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RJC|1|K|A|466
8RJC|1|K|U|467
8RJC|1|K|U|468
8RJC|1|K|C|469
8RJC|1|K|A|470
8RJC|1|K|A|471
8RJC|1|K|C|472
*
8RJC|1|K|G|682
8RJC|1|K|C|683
8RJC|1|K|G|684
8RJC|1|K|C|685
8RJC|1|K|A|686
8RJC|1|K|U|687
8RJC|1|K|U|688
8RJC|1|K|U|689
Current chains
- Chain K
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain r
- 60S ribosomal protein L28
Coloring options: