IL_8RXH_001
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GAC*G(PSU)C
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_001 not in the Motif Atlas
- Homologous match to IL_8C3A_001
- Geometric discrepancy: 0.2795
- The information below is about IL_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RXH|1|L1|G|4
8RXH|1|L1|A|5
8RXH|1|L1|C|6
*
8RXH|1|L7|G|165
8RXH|1|L7|PSU|166
8RXH|1|L7|C|167
Current chains
- Chain L1
- LSUa_rRNA_chain_1
- Chain L7
- 5.8S_rRNA_chain_7
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain LG
- 60S ribosomal protein L7a
- Chain LM
- Ribosomal protein L15
- Chain LV
- Putative 60S ribosomal protein L23a
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