IL_8RXH_023
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CUGAAG*UGGAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_023 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.1861
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.3
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
8RXH|1|L1|C|445
8RXH|1|L1|U|446
8RXH|1|L1|G|447
8RXH|1|L1|A|448
8RXH|1|L1|A|449
8RXH|1|L1|G|450
*
8RXH|1|L7|U|13
8RXH|1|L7|G|14
8RXH|1|L7|G|15
8RXH|1|L7|A|16
8RXH|1|L7|U|17
8RXH|1|L7|G|18
Current chains
- Chain L1
- LSUa_rRNA_chain_1
- Chain L7
- 5.8S_rRNA_chain_7
Nearby chains
- Chain LC
- Putative ribosomal protein L1a
- Chain LT
- Putative 60S ribosomal protein L17
- Chain Lf
- 60S ribosomal protein L32
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