IL_8RXH_058
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- G(OMG)A*UCAUC
- Length
- 8 nucleotides
- Bulged bases
- 8RXH|1|L1|C|971, 8RXH|1|L1|A|972
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_058 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.1618
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8RXH|1|L1|G|958
8RXH|1|L1|OMG|959
8RXH|1|L1|A|960
*
8RXH|1|L1|U|970
8RXH|1|L1|C|971
8RXH|1|L1|A|972
8RXH|1|L1|U|973
8RXH|1|L1|C|974
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain LA
- Putative 60S ribosomal protein L2
- Chain LM
- Ribosomal protein L15
- Chain LT
- Putative 60S ribosomal protein L17
- Chain Lj
- Ribosomal protein L37
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