IL_8RXH_067
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GAUUA*UUCUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_067 not in the Motif Atlas
- Homologous match to IL_8C3A_044
- Geometric discrepancy: 0.1947
- The information below is about IL_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8RXH|1|L1|G|1056
8RXH|1|L1|A|1057
8RXH|1|L1|U|1058
8RXH|1|L1|U|1059
8RXH|1|L1|A|1060
*
8RXH|1|L1|U|1092
8RXH|1|L1|U|1093
8RXH|1|L1|C|1094
8RXH|1|L1|U|1095
8RXH|1|L1|C|1096
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L8
- 5S ribosomal RNA; 5S rRNA
- Chain LN
- Putative 60S ribosomal protein L10
- Chain LO
- Putative 60S ribosomal protein L5
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